Doctoral Program of Industry-Academy Cooperation (Scholarship is NTD 30,000/month) 

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Publications

• Phylogenetic and Structural Analysis of NIN-Like Proteins With a Type I/II PB1 Domain That Regulates Oligomerization for Nitrate Response.

Front. Plant Sci. 12:672035. 31 May 2021​

Hsin, K.T., Yang, T.J., Lee, Y.H. and Cheng, Y.S.*

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• A novel thylakoid-less isolate fills a billion-year gap in the evolution of Cyanobacteria.

Curr. Biol. 13 May 2021

Rahmatpour N. , Hauser D.A. , Nelson J.M. , Chen P.Y. , Villarreal A. J. C. , Ho M.-Y.*, Li F.-W.

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• Inhibitor development of MTH1 via high-throughput screening with fragment based library and MTH1 substrate binding cavity.

Bioorg. Chem. Volume 110, May 2021, 104813

Peng Cheng, Li Y.-H., Yu C.W., Cheng Z.-H., Liu J.-R., Hsu J.-L., Hsin L.-W., Huang C.-T., Juan H.-F., Chern J.-W., Cheng Y.-S.*

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• An effective computational‐screening strategy for simultaneously improving both catalytic activity and thermostability of α‐l‐rhamnosidase.

Biotechnol. Bioeng. 20 March 2021

Li Lijun, Li Wenjing, Gong Jianye, Xu Yanyan, Wu Zheyu, Jiang Zedong, Cheng Y.‐S., Li Qingbiao, Ni Hui

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• The Arabidopsis histone demethylase JMJ28 regulates CONSTANS by interacting with FBH transcription factors.

Plant Cell, koab014, 25 January 2021

Hung F.Y., Lai Y.C., Wang J., Feng Y.R., Shih Y.H., Chen J.H., Sun H.C., Yang S.*, Li C.*, Wu K.*

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• Sensitive and Specific Cadmium Biosensor Developed by Reconfiguring Metal Transport and Leveraging Natural Gene Repositories.

ACS Sens. 6:995-1002. January 14, 2021

He M.-Y., Lin Y.-J., Kao Y.-L.,Kuo P.,Grauffel C., Lim C.,Cheng Y.-S., Chou H.-H. David*

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• Elucidation of enzymes involved in the biosynthetic pathway of bioactive polyacetylenes in Bidens pilosa using integrated omics approaches.

J. Exp. Bot. eraa457, 16 October 2020​.

Chung, H.-H.#, Ting, H.-M.#, Wang, W.-H., Chao, Y.-T., Hsieh, C.-H., Apaya, M.K., Sung, Y.-C., Lin, S.-S., Hwu, F.-Y., and Shyur, L.-F. (# Co-first author).

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• The expression of long non-coding RNAs is associated with H3Ac and H3K4me2 changes regulated by the HDA6-LDL1/2 histone modification complex in Arabidopsis.

NAR Genom. Bioinform., Vol. 2, Issue 3, September 2020.

Hung F.-Y. , Chen C., Yen M.-R., Hsieh J.-W. A., Li C., Shih Y.-H., Chen F.-F., Chen P.-Y., Cui Y., Wu K.*

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• Structure of Arabidopsis HISTONE DEACETYLASE15.

Plant Physiol​. Sep 2020.

Chen, C.-Y., Tu, Y.-T., Hsu, J.-C., Hung, H.-C., Liu, T.-C., Lee, Y.-H., Chou, C.-C., Cheng, Y.-S.*, and Wu, K.*

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• Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box.

Plant Mol Biol. Aug 2020.

Chen, C.-Y., Lin, P.-H., Chen, K.-H. Cheng, Y.-S.*

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• HDA6 dependent chromatin deacetylation orchestrates mRNA polyadenylation.

Genome Res. Aug 2020.​

Lin, J., Hung, F.-Y., Ye, C., Hong, L., Shih, Y.-H., Wu, K.*, and Li, Q.Q.

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• Regulation of micoRNA2111 and its target IbFBK in sweet potato on wounding

Plant Sci. March 2020, 110391

Weng S.-T., Kuo Y.-W., King Y.-C., Lin H.-H., Tu P.-Y., Tung K.-S., Jeng S.-T.*

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• Long-read bitter gourd (Momordica charantia) genome and the genomic architecture of nonclassic domestication.

P.N.A.S. Jun 2020, 117 (25) 14543-14551

Matsumura H., Hsiao M.-C., Lin Y.-P., Toyoda A., Taniai N., Tarora K., Urasaki N., Anand S. S. , Dhillon N. P. S. , Schafleitner R., Lee C.-R.*

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• Glucosinolate Transporter1 involves in salt-induced jasmonate signaling and alleviates the repression of lateral root growth by salt in Arabidopsis.

Plant Sci. 2020 August.​

Kuo H-Y, Kang F-C, Wang Y-Y.*

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• STRESS INDUCED FACTOR 2 Regulates Arabidopsis Stomatal Immunity Through Phosphorylation of the Anion Channel SLAC1.

Plant Cell. [published online ahead of print, 2020 Apr 23].

Chan C., Panzeri D., Okuma E., Tõldsepp K., Wang Y.-Y, Louh G.-Y., Chin T.-C., Yeh Y.-H., Yeh H.-L., Yekondi S., Huang Y.-H., Huang T.-Y., Chiou T.-J., Murata Y., Kollist H., Zimmerli L.*

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• Arabidopsis JMJ29 is involved in trichome development by regulating the core trichome initiation gene GLABRA3.

Plant J. 2020 May 23.

Hung FY, Chen JH, Feng YR, Lai YC, Yang S, Wu K.*

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• Histone demethylase SlJMJ6 promotes fruit ripening by removing H3K27 methylation of ripening‐related genes in tomato.

New Phytol. 07 April 2020.

Li, Z., Jiang, G., Liu, X., Ding, X., Zhang, D., Wang, X., Zhou, Y., Yan, H., Li, T., Wu, K.*, Jiang, Y. and Duan, X.

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• The Role of a Glucosinolate-Derived Nitrile in Plant Immune Responses.

Front. Plant Sci., 10 March 2020

Ting, H.M.*, Cheah, B.H., Chen, Y.C., Yeh, P.M., Cheng, C.P., Yeo, F.K.S., Vie, A.K., Rohloff, J., Winge, P., Bones, A.M., and Kissen, R.

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• SWI3B and HDA6 interact and are required for transposon silencing in Arabidopsis.

Plant J. 2019 December 27.
Yang J., L. Yuan, M.‐R. Yen, F. Zheng, R. Ji, T. Peng, D. Gu, S. Yang, Y. Cui, P.‐Y. Chen, K. Wu*, X. Liu

• The Glutamate Receptor-Like Protein GLR3.7 Interacts With 14-3-3ω and Participates in Salt Stress Response in Arabidopsis thaliana.

Front. Plant Sci. September 2019

Wang, P.H., Lee, C.E., Lin, Y.S., Lee, M.H., Chen, P.Y., Chang, H.C., Chang, I.F.*

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• Regulation of ABI5 expression by ABF3 during salt stress responses in Arabidopsis thaliana.

Bot Stud. August 2019

Chang, H.C., Tsai, M.C., Wu, S.S., Chang, I.F.*

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• Temperature Stress and Redox Homeostasis: The Synergistic Network of Redox and Chaperone System in Response to Stress in Plants.

Heat Shock Proteins​. 2019

Wu HC., Vignols F., Jinn TL.*

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• MicroR408 regulates defense response upon wounding in sweet potato.

J. Exp. Bot. 2019

Kuo, Y.W., Lin, J.S., Li, Y.C., Jhu M.Y., King, Y.C., Jeng, S.T.*

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• The p38-like MAP kinase modulated H2O2 accumulation in wounding signaling pathways of sweet potato.

Plant Sci. 2019

Lin, H.H., King Y.C., Li, Y.C., Lin, C.C., Chen, Y.C., Lin, J.S., Jeng, S.T.*